Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015950782.1_cds_XP_016491081.1_81437
CDS Infomation

[gene=LOC107810773] [db_xref=GeneID:107810773] [protein=probable beta-D-xylosidase 2] [protein_id=XP_016491081.1] [location=join(10703..11107,13259..13540,14796..15414,15484..15897,16419..17011)] [gbkey=CDS]
Sequence

ATGAGTGGAGGCCTCAGCAACCCCACCTCTACTCTGTTCATTTTTTGCTTCTTTCTAATT
GCAATATCTGTTCAAGCTCGTCCCCCATTTGCCTGTGACCCAAGAGATAGGGCTACCAAA
AACTTCCCCTTTTGTCAAACAAATTTGGCCATTGGTGATAGAGTAAGGGACCTCATTGGG
AGGTTAACATTGCAAGAGAAGGTGAAATTATTGGGGAATACTGCTGCAGCTGTGTCGAGG
CTGGGAATCAAAGGCTATGAGTGGTGGTCGGAGGCACTACATGGAGTGTCAAATGTAGGA
CCAGGGACTAAGTTTGGTGGTGATTTTCCAGGAGCCACCAGCTTCCCTCAAGTCATTAGT
ACTGCTGCTTCTTTCAATGCTTCCTTGTGGGAAGAAATTGGACGGGTAGTATCAGATGAA
GCAAGAGCAATGTACAACGGAGAGATGGGAGGACTGACATATTGGAGCCCAAATGTGAAC
ATATTTAGAGACCCAAGGTGGGGCCGGGGACAGGAGACACCCGGTGAGGATCCAGTGGTA
GCCGGTATATACGCCGAGCGTTATGTGAGAGGGTTACAGGGAAACGAGGAAGGTGACCGG
CTGAAAGTAGCGGCATGTTGCAAGCACTACACGGCTTACGATCTCGATAACTGGAGTGGG
GTCGATAGATTCCACTTTAATGCTAAGGTTAGCAAGCAAGACATGGAAGATACATTCGAC
GTACCATTTAGAAGTTGTGTTAGAGAAGGTAAGGTGGCTAGTGTTATGTGCTCTTACAAT
CAAGTCAATGGCATACCAACTTGTGCTGATCCAGAACTTCTTCGCAAAACCATACGCGGC
GGTTGGGGTCTTAACGGCTACATTGTCTCCGACTGTGACTCCGTCGGAGTTTTCTACGAA
AATCAACACTATACATCAACACCTGAGGAAGCTGCTGCTGATGCTATCAAAGCAGGCCTT
GATTTGGACTGTGGGCCTTTTCTGGCCCAACATACTGAGACTGCAGTGCAAAGTGGTATC
CTTAAAGAGGCTTCTATAGATACCAATTTAGCTAATACAGTTGCTGTCCAGATGAGGCTT
GGTATGTTTGATGGAGAACCATCAGCCCAACCTTATGGTCACCTTGGCCCGAGAGATGTT
TGCAGCCCGGCCCATCAAGAACTCGCGCTTGAAGCTGCTAGACAGGGCATTGTTCTTCTT
AAGAATCATGGGCCTGTTCTTCCTCTTTCTCCTCCACGCCATCGCACTGTTGCTGTCATT
GGACCTAATTCGGATGTTACCGTCACAATGATTGGAAATTACGCAGGTGTTGCATGTGGA
TACACAAGCCCATTACAAGGAATAGCCAAGTATGCAAAGACCATTCACCAAGAAGGTTGT
GGTGATGTAGCTTGCTCTGATGATAGACTATTTCCTAGAGCTGTAGATGCTGCACGTCAA
GCGGACGCAACTGTGCTAGTAATGGGCCTGGACCAATCTATTGAGGCTGAATTCAGAGAC
AGAACTGGGCTCCTTTTGCCTGGGTTCCAACAAGATCTCATCTCCCAAGTATCCAAGGCC
TCAAGAGGTCCTGTTATATTGGTCCTTATGTCTGGGGGCCCAGTTGATGTTACATTTGCA
GAGAAGGATCCACGAATTGGTGGTATTGTTTGGGTTGGTTATCCTGGACAAGCCGGTGGT
GCTGCTATTGCTGATGTCCTTTTTGGAGCCCATAATCCAGGTGGGAAGCTGCCAATGACA
TGGTACCCACAGGAGTACCTAAACAATTTACCAATGACAACAATGGACATGCGTGCAAAC
TTAGCCAAAGGTTACCCTGGAAGAACATACCGTTTCTACAAAGGTCCATTAGTATACCCA
TTTGGGCATGGATTAAGCTACACTAAATTCATAAACACAATTGCTGAAGTTCCAAACATG
TTAGCCATTCCAATATTTGGTCGCCATGCTTCCAACACAACAAGCAAAGCAATCAGAGTA
ACACATGCAAAATGCAGTAAATTATCAATTCAAGTTCATATCGACGTGAAGAACGTAGGA
TCAAAGGACGGTACACAAACATTGCTCGTATTTTCAAAGCCGCCAGTTGGACTTTGGGTG
CCACATAAACAATTGGTCGCGTTTCAAAAAGTGTATGTCCCGGCGGGTTCGCTGCAACGA
GTGACGATAAATATTCATGTTTGCAAGTATTTAAGCGTGGTAGATAGGGCTGGTGTTCGA
AGAATTCCAATAGGTGAACACAGTCTTCATATTGGTGATGCTAAGCATACCTTGTCACTT
CAAGCATCAGTTCTTGGGGTTATTAAATCTTGA

Peptide Sequence

PEP ID

XP_016491081.1
PEP Infomation

PREDICTED: probable beta-D-xylosidase 2 [Nicotiana tabacum]
Sequence

MSGGLSNPTSTLFIFCFFLIAISVQARPPFACDPRDRATKNFPFCQTNLAIGDRVRDLIG
RLTLQEKVKLLGNTAAAVSRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVIS
TAASFNASLWEEIGRVVSDEARAMYNGEMGGLTYWSPNVNIFRDPRWGRGQETPGEDPVV
AGIYAERYVRGLQGNEEGDRLKVAACCKHYTAYDLDNWSGVDRFHFNAKVSKQDMEDTFD
VPFRSCVREGKVASVMCSYNQVNGIPTCADPELLRKTIRGGWGLNGYIVSDCDSVGVFYE
NQHYTSTPEEAAADAIKAGLDLDCGPFLAQHTETAVQSGILKEASIDTNLANTVAVQMRL
GMFDGEPSAQPYGHLGPRDVCSPAHQELALEAARQGIVLLKNHGPVLPLSPPRHRTVAVI
GPNSDVTVTMIGNYAGVACGYTSPLQGIAKYAKTIHQEGCGDVACSDDRLFPRAVDAARQ
ADATVLVMGLDQSIEAEFRDRTGLLLPGFQQDLISQVSKASRGPVILVLMSGGPVDVTFA
EKDPRIGGIVWVGYPGQAGGAAIADVLFGAHNPGGKLPMTWYPQEYLNNLPMTTMDMRAN
LAKGYPGRTYRFYKGPLVYPFGHGLSYTKFINTIAEVPNMLAIPIFGRHASNTTSKAIRV
THAKCSKLSIQVHIDVKNVGSKDGTQTLLVFSKPPVGLWVPHKQLVAFQKVYVPAGSLQR
VTINIHVCKYLSVVDRAGVRRIPIGEHSLHIGDAKHTLSLQASVLGVIKS

Transcript Sequence

Gene sequence data has not been registered.